STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacATIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (256 aa)    
Predicted Functional Partners:
folP
KEGG: bth:BT3646 2.0e-78 dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 8.96.
       0.824
EFB36166.1
YbbR-like protein.
 
  
 0.782
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.643
EFB36321.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: bth:BT1548 1.0e-209 phosphoglucomutase phosphomannomutase K01840.
   
 
 0.627
glmM
Phosphoglucosamine mutase; KEGG: bfs:BF3668 4.2e-181 putative phosphoglucomutase/phosphomannomutase family protein K01840; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.627
pta
KEGG: bth:BT3692 3.8e-116 phosphate acetyltransferase K00625.
       0.589
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.545
EFB34461.1
7TM receptor with intracellular HD hydrolase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.473
argR
Arginine repressor; Regulates arginine biosynthesis genes.
   
    0.461
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
   
 0.426
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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