STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35607.1Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xcv:XCV4356 7.6e-134 bga2; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family. (825 aa)    
Predicted Functional Partners:
EFB35608.1
Glycosyl hydrolase, family 53; KEGG: sde:Sde_3710 1.9e-75 arabinogalactan endo-1,4-beta-galactosidase K01224.
  
  0.841
EFB33804.1
Glycosyl hydrolase family 35; KEGG: xfa:XF0840 2.3e-109 beta-galactosidase K01190.
 
 
 0.793
EFB35185.1
KEGG: bth:BT3340 0. beta-galactosidase K01190.
  
  
 
0.782
EFB35559.1
Alpha-galactosidase; KEGG: bfr:BF0287 1.3e-271 alpha-galactosidase K07407.
 
  
 0.756
EFB35609.1
Hypothetical protein.
  
    0.727
EFB35610.1
SusD family protein.
       0.712
EFB36950.1
KEGG: bth:BT2493 3.3e-110 ROK family transcriptional repressor, with glucokinase domain K00845; Psort location: Cytoplasmic, score: 9.26.
     
 0.711
EFB36358.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.698
EFB36361.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.698
EFB35611.1
TonB-linked outer membrane protein, SusC/RagA family; Psort location: OuterMembrane, score: 9.49.
       0.670
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.