STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35318.1Hypothetical protein; KEGG: hit:NTHI1629 6.1e-07 putative 5'(3')-deoxyribonucleotidase K01112. (328 aa)    
Predicted Functional Partners:
EFB35945.1
Hypothetical protein.
  
     0.767
EFB34408.1
Hypothetical protein.
  
     0.762
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.761
EFB35094.1
Phosphate-selective porin O and P.
  
     0.757
EFB36249.1
Phosphate-selective porin O and P.
  
     0.752
EFB36655.1
Hypothetical protein; KEGG: mxa:MXAN_3839 6.6e-13 rluB; ribosomal large subunit pseudouridine synthase B K06178.
  
     0.745
EFB35850.1
Hypothetical protein.
  
     0.744
EFB35634.1
Hypothetical protein.
 
     0.739
EFB34182.1
Tetratricopeptide repeat protein.
  
     0.739
EFB36601.1
HD domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.709
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.