STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35339.1Acetyltransferase, GNAT family; KEGG: bcz:BCZK1238 1.1e-13 acetyltransferase K00680. (191 aa)    
Predicted Functional Partners:
EFB35340.1
Hypothetical protein.
       0.741
EFB35341.1
Hypothetical protein.
       0.644
ilvA
KEGG: tma:TM0356 4.4e-106 threonine dehydratase catabolic K01754; Psort location: Cytoplasmic, score: 8.96.
    
  0.579
EFB35551.1
Cupin domain protein; KEGG: psp:PSPPH_2917 8.7e-06 DNA-binding protein K00517; Psort location: Cytoplasmic, score: 8.96.
    
 0.571
EFB35342.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xcv:XCV4356 6.3e-124 bga2; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
       0.501
EFB35343.1
Glycosyl hydrolase, family 31; KEGG: aba:Acid345_0898 2.4e-139 alpha-glucosidase K01187; Belongs to the glycosyl hydrolase 31 family.
       0.501
EFB36536.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
   0.401
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.