STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35349.1CDP-alcohol phosphatidyltransferase; KEGG: bth:BT1523 7.5e-56 CDP-diacylglycerol-inositol 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (222 aa)    
Predicted Functional Partners:
pgpA
KEGG: bth:BT1525 7.7e-38 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.924
EFB35348.1
PAP2 family protein; KEGG: sce:YDR072C 1.1e-10 IPT1, KTI6, SYR4; Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), which is the most abundant sphingolipid in cells, mutation confers resistance to the antifungals syringomycin E and DmAMP1 in some growth media; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.920
EFB35347.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
    0.895
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
  
  
 0.878
EFB35537.1
Inositol-3-phosphate synthase; KEGG: bth:BT1526 2.9e-148 myo-inositol-1-phosphate synthase K01858; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.816
pgpA-2
KEGG: bth:BT1525 8.5e-32 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.749
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 0.728
EFB33972.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.660
cdsA
KEGG: bfr:BF0773 1.7e-79 phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDS family.
    
 0.587
EFB35480.1
KEGG: bfr:BF0710 1.2e-48 CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.579
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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