STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgpAKEGG: bth:BT1525 7.7e-38 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00. (180 aa)    
Predicted Functional Partners:
EFB35349.1
CDP-alcohol phosphatidyltransferase; KEGG: bth:BT1523 7.5e-56 CDP-diacylglycerol-inositol 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.924
EFB35348.1
PAP2 family protein; KEGG: sce:YDR072C 1.1e-10 IPT1, KTI6, SYR4; Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), which is the most abundant sphingolipid in cells, mutation confers resistance to the antifungals syringomycin E and DmAMP1 in some growth media; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.846
EFB35347.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
    0.812
EFB36854.1
Phospholipase D domain protein; KEGG: bfr:BF3733 2.2e-104 putative cardiolipin synthetase K01005.
     
 0.639
EFB35943.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.639
EFB35351.1
Hypothetical protein.
       0.558
EFB35353.1
Hypothetical protein.
 
     0.498
EFB35352.1
Hypothetical protein.
       0.422
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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