STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35423.1Glycosyltransferase family 36; KEGG: vfi:VF2147 5.8e-120 N,N'-diacetylchitobiose phosphorylase K00754; Psort location: CytoplasmicMembrane, score: 9.82. (831 aa)    
Predicted Functional Partners:
EFB35434.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 3.2e-54 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.897
pulA
Pullulanase, type I; KEGG: bth:BT4689 6.5e-160 pullulanase precursor K01200; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.834
EFB36321.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: bth:BT1548 1.0e-209 phosphoglucomutase phosphomannomutase K01840.
    
 0.822
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688.
     
 0.817
EFB36836.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 9.8e-38 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.770
EFB34718.1
GDSL-like protein; KEGG: chu:CHU_0721 4.0e-25 hypothetical protein K01238.
  
  
 0.749
EFB35662.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tma:TM0025 3.1e-169 beta-glucosidase K05349; Psort location: Periplasmic, score: 9.44.
 
  
 0.690
EFB34814.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: bth:BT3314 1.1e-262 thermostable beta-glucosidase B K05349; Psort location: Periplasmic, score: 9.44; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.689
EFB35044.1
Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: tma:TM0076 3.7e-109 beta-glucosidase K05349; Psort location: Periplasmic, score: 9.44.
 
  
 0.603
EFB34051.1
Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: xoo:XOO4423 5.5e-163 glucan 1,4-beta-glucosidase K01188; Psort location: Periplasmic, score: 9.44.
 
  
 0.594
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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