STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35427.1KEGG: mta:Moth_0429 1.4e-141 mannitol dehydrogenase K00040. (529 aa)    
Predicted Functional Partners:
uxuA
Putative mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.989
uxaC
Glucuronate isomerase; KEGG: bth:BT0823 7.3e-200 uronate isomerase K01812.
 
 
 0.958
EFB36488.1
SAF domain protein; KEGG: bth:BT0486 2.4e-194 altronate hydrolase K01685.
 
 
 0.759
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
    
 0.624
EFB36153.1
Putative o-succinylbenzoate synthase; KEGG: chu:CHU_2415 1.1e-63 clcB; chloromuconate cycloisomerase K01860; Psort location: Cytoplasmic, score: 8.96.
    
 0.459
pgi
KEGG: bfr:BF3812 1.0e-186 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.26; Belongs to the GPI family.
    
 0.440
EFB36950.1
KEGG: bth:BT2493 3.3e-110 ROK family transcriptional repressor, with glucokinase domain K00845; Psort location: Cytoplasmic, score: 9.26.
     
 0.434
rpe
KEGG: bfr:BF3902 1.5e-71 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.96.
     
 0.429
EFB35428.1
RmuC domain protein; KEGG: dre:317747 4.8e-05 rock2; rho-associated, coiled-coil containing protein kinase 2 K04514.
       0.423
EFB36368.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: bth:BT0347 2.2e-285 transketolase K00615; Belongs to the transketolase family.
     
 0.422
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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