STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35492.1MFS transporter, SP family; KEGG: cal:orf19.3668 9.0e-44 HGT2; hexose transporter K01804; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (483 aa)    
Predicted Functional Partners:
EFB35493.1
Hypothetical protein.
       0.757
EFB35494.1
KEGG: bfs:BF3908 7.2e-106 putative 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 8.96.
       0.575
EFB35495.1
Hypothetical protein; KEGG: bth:BT3820 6.2e-84 putative DNA polymerase III, delta subunit K02341; Psort location: Cytoplasmic, score: 8.96.
       0.566
EFB33671.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 5.7e-145 NADH dehydrogenase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
  
 0.502
EFB35600.1
KEGG: ehi:224.t00010 6.0e-09 leucine rich repeat protein K01768.
    
 0.499
aepX
Phosphoenolpyruvate mutase; KEGG: azo:azo2698 8.6e-126 pepM; putative phosphoenolpyruvate phosphomutase K01841; Psort location: Cytoplasmic, score: 8.96.
    
 0.484
EFB35924.1
acyl-CoA dehydrogenase, C-terminal domain protein; KEGG: bth:BT1806 7.5e-214 acyl-CoA dehydrogenase K00257; Psort location: Cytoplasmic, score: 8.96.
     
 0.461
EFB36175.1
Transporter, major facilitator family protein; KEGG: tpe:Tpen_1087 0.0016 proton-translocating NADH-quinone oxidoreductase, chain L; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.459
EFB36704.1
KEGG: lpl:lp_2852 1.0e-28 4-carboxymuconolactone decarboxylase (putative) K01607.
  
    0.446
EFB35457.1
Hypothetical protein; KEGG: bth:BT2145 9.6e-65 ribonucleoside-diphosphate reductase alpha chain K00525.
   
  0.442
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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