STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldHGliding motility-associated lipoprotein GldH; Psort location: Cytoplasmic, score: 8.96. (160 aa)    
Predicted Functional Partners:
EFB35496.1
PSP1 C-terminal domain protein; KEGG: ftf:FTF1227 2.6e-08 rne; ribonuclease E K08300.
       0.781
EFB35495.1
Hypothetical protein; KEGG: bth:BT3820 6.2e-84 putative DNA polymerase III, delta subunit K02341; Psort location: Cytoplasmic, score: 8.96.
 
     0.680
EFB35167.1
Hypothetical protein.
  
     0.678
EFB34040.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.649
EFB34469.1
Bacteroidetes-specific putative membrane protein.
  
     0.636
EFB35418.1
Hypothetical protein.
  
     0.629
EFB36420.1
Hypothetical protein.
  
     0.612
EFB35494.1
KEGG: bfs:BF3908 7.2e-106 putative 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 8.96.
       0.611
EFB34128.1
Tetratricopeptide repeat protein.
  
   
 0.610
EFB34954.1
Two component regulator propeller.
  
     0.605
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.