STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPenicillin-binding protein 2; KEGG: cph:Cpha266_0817 7.6e-79 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 8.02. (616 aa)    
Predicted Functional Partners:
EFB35498.1
Cell cycle protein, FtsW/RodA/SpoVE family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.974
mreC
Rod shape-determining protein MreC.
 
 
 0.943
EFB35502.1
Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 1.3e-67 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97.
 
 
 
 0.943
EFB35643.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: bfr:BF0311 3.6e-191 penicillin-binding protein K03587; Psort location: CytoplasmicMembrane, score: 8.02.
  
  
 
0.906
EFB35647.1
Cell cycle protein, FtsW/RodA/SpoVE family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.878
EFB36209.1
Transglycosylase; KEGG: bfs:BF2276 2.7e-257 putative penicillin-binding peptidoglycan biosynthesis-related exported protein K05366.
  
 
 
 0.782
EFB35650.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.775
EFB36141.1
Transglycosylase; KEGG: chu:CHU_3131 9.4e-168 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein.
  
 
 0.774
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.714
mreD
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 9.46.
       0.699
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.