STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35507.1Hypothetical protein. (603 aa)    
Predicted Functional Partners:
EFB35508.1
Hypothetical protein.
 
    0.881
EFB35127.1
Hypothetical protein.
  
  
 0.781
EFB34042.1
Hypothetical protein; KEGG: chu:CHU_2041 8.2e-71 CHU large protein; candidate polyfunctional acetylxylan esterase/b-xylosidase/A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238.
 
 
   0.701
EFB36836.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 9.8e-38 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.661
EFB35609.1
Hypothetical protein.
  
     0.630
EFB35509.1
Hypothetical protein; KEGG: xcb:XC_1002 1.2e-23 alpha-glucosidase K01187.
 
     0.624
EFB36929.1
SusD family protein.
  
     0.562
EFB36936.1
Hypothetical protein; KEGG: rba:RB5312 4.2e-69 pel; pectate lyase K01728.
  
     0.562
EFB35688.1
Hypothetical protein.
  
     0.559
EFB36845.1
Putative endoglucanase A; KEGG: sde:Sde_2636 2.0e-62 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.548
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.