STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmMPhosphoglucosamine mutase; KEGG: bfs:BF3668 4.2e-181 putative phosphoglucomutase/phosphomannomutase family protein K01840; Psort location: Cytoplasmic, score: 8.96. (463 aa)    
Predicted Functional Partners:
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: tfu:Tfu_1394 7.4e-39 mannose-1-phosphate guanylyltransferase / phosphomannomutase K00966:K01840; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.968
EFB34713.1
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bth:BT0558 3.2e-135 mannose-1-phosphate guanylyltransferase K00971.
 
 
 0.900
EFB35326.1
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bth:BT2781 7.4e-104 mannose-1-phosphate guanylyltransferase K00971.
 
 
 0.889
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
 
 
 0.877
EFB35522.1
Hypothetical protein.
       0.776
EFB34837.1
Putative glucosamine-6-phosphate deaminase; KEGG: bfr:BF3116 2.4e-263 glucosamine-6-phosphate isomerase K02564.
    
 0.719
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.704
EFB35524.1
Hypothetical protein; KEGG: ftl:FTL_1357 7.7e-06 UTP--glucose-1-phosphate uridylyltransferase K00963.
  
 
 0.704
glmS-2
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.703
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
   
 
 0.627
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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