STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35524.1Hypothetical protein; KEGG: ftl:FTL_1357 7.7e-06 UTP--glucose-1-phosphate uridylyltransferase K00963. (303 aa)    
Predicted Functional Partners:
EFB34529.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100.
  
 
 0.902
EFB35523.1
DHHA1 domain protein; KEGG: sat:SYN_00533 3.9e-07 tRNA nucleotidyltransferase.
       0.824
rfbB
KEGG: bth:BT0466 1.2e-169 dTDP-glucose 4,6-dehydratase K01710.
  
 
 0.819
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.723
EFB35737.1
Nucleotide sugar dehydrogenase; KEGG: spr:spr0318 4.5e-168 cps2K; UDPglucose 6-dehydrogenase K00012.
  
 
 0.704
glmM
Phosphoglucosamine mutase; KEGG: bfs:BF3668 4.2e-181 putative phosphoglucomutase/phosphomannomutase family protein K01840; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.704
EFB34533.1
Nucleotide sugar dehydrogenase; KEGG: bth:BT0599 1.3e-186 UDP-glucose 6-dehydrogenase K00012; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.704
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.668
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: tfu:Tfu_1394 7.4e-39 mannose-1-phosphate guanylyltransferase / phosphomannomutase K00966:K01840; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.630
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
  
 
 0.618
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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