STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35085.1Glycosyl hydrolase, family 43; KEGG: shm:Shewmr7_1980 3.9e-19 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (551 aa)    
Predicted Functional Partners:
EFB34047.1
Hypothetical protein; KEGG: shm:Shewmr7_1980 6.2e-29 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.735
EFB35757.1
Hypothetical protein; KEGG: sus:Acid_2992 1.2e-64 alpha-N-arabinofuranosidase K01209.
 
 
  0.716
EFB34682.1
SusD family protein.
 
     0.715
EFB36847.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
  
  0.713
EFB35183.1
Carbohydrate binding domain protein; KEGG: sus:Acid_2992 2.1e-74 alpha-N-arabinofuranosidase K01209.
 
 
  0.705
EFB34056.1
Glycosyl hydrolase, family 43; KEGG: chu:CHU_2041 1.3e-95 CHU large protein; candidate polyfunctional acetylxylan esterase/b-xylosidase/A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238.
 
    0.692
EFB34675.1
Carbohydrate binding domain protein; KEGG: sus:Acid_2992 7.2e-90 alpha-N-arabinofuranosidase K01209.
 
 
  0.678
EFB34055.1
Glycosyl hydrolase, family 43; KEGG: pat:Patl_3728 4.2e-30 alpha-L-arabinofuranosidase K01209; Belongs to the glycosyl hydrolase 43 family.
 
    0.665
EFB36923.1
Glycosyl hydrolase, family 43; KEGG: bli:BL03023 2.5e-39 xynBB; xylan beta-1,4-xylosidase K01198; Belongs to the glycosyl hydrolase 43 family.
  
     0.649
EFB34058.1
Glycosyl hydrolase, family 43; KEGG: chu:CHU_2041 7.8e-62 CHU large protein; candidate polyfunctional acetylxylan esterase/b-xylosidase/A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238.
  
     0.643
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.