STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35097.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
EFB33980.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
EFB35999.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.762
EFB35112.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
EFB34772.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.755
EFB34319.1
Hypothetical protein.
  
     0.642
EFB35098.1
Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.596
EFB35099.1
Transposase, IS605 OrfB family; KEGG: hpa:HPAG1_0201 5.1e-57 putative transposase OrfB K01400; Psort location: Cytoplasmic, score: 8.96.
       0.596
EFB34981.1
Peptidase C1-like family; KEGG: bba:Bd1649 1.5e-08 pepC; putative aminopeptidase C K01372; Psort location: Cytoplasmic, score: 8.96.
  
     0.495
EFB36708.1
Hypothetical protein; KEGG: bth:BT2230 1.6e-09 DNA polymerase III alpha subunit K02337.
    
  0.482
EFB35096.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.417
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.