STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35146.1GtrA-like protein; Psort location: CytoplasmicMembrane, score: 9.46. (145 aa)    
Predicted Functional Partners:
EFB35144.1
HAD phosphoserine phosphatase-like hydrolase, family IB; KEGG: ctc:CTC01739 4.8e-13 phosphoserine phosphatase K01079.
      0.856
EFB35147.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.753
EFB36349.1
Hypothetical protein.
  
     0.702
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.692
EFB36249.1
Phosphate-selective porin O and P.
  
     0.687
EFB36655.1
Hypothetical protein; KEGG: mxa:MXAN_3839 6.6e-13 rluB; ribosomal large subunit pseudouridine synthase B K06178.
  
     0.672
EFB36420.1
Hypothetical protein.
  
     0.672
EFB35094.1
Phosphate-selective porin O and P.
  
     0.670
EFB35945.1
Hypothetical protein.
  
     0.647
EFB35850.1
Hypothetical protein.
  
     0.631
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.