STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35148.1Core-2/I-Branching enzyme; KEGG: cfa:493990 1.5e-06 XYLT2; xylosyltransferase II K00771; Psort location: Cytoplasmic, score: 8.96. (291 aa)    
Predicted Functional Partners:
EFB35150.1
Hypothetical protein.
       0.757
EFB35149.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.619
EFB35151.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5429 4.8e-29 beta-1,3-N-acetylglucosaminyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.618
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: tfu:Tfu_1394 7.4e-39 mannose-1-phosphate guanylyltransferase / phosphomannomutase K00966:K01840; Psort location: Cytoplasmic, score: 8.96.
  
 0.544
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.