STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35162.1Glycosyltransferase, group 2 family protein; KEGG: mma:MM0653 2.5e-23 glycosyltransferase involved in cell wall biogenesis. (258 aa)    
Predicted Functional Partners:
EFB35163.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 1.5e-64 glycosyl transferase, group 1 K00703; Psort location: Cytoplasmic, score: 8.96.
 
    0.903
EFB35164.1
Hypothetical protein.
       0.773
EFB36903.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csa:Csal_1693 6.7e-55 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.726
EFB34961.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 1.0e-19 glycosyltransferase K00754.
  
  
  0.724
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
  
  0.691
EFB36392.1
Glycosyltransferase, group 2 family protein; KEGG: hit:NTHI2002 6.8e-46 lsgF; putative UDP-galactose--lipooligosaccharide galactosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.611
EFB35580.1
Glycosyltransferase, group 2 family protein; KEGG: pto:PTO0268 4.9e-14 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.582
EFB36648.1
Chain length determinant protein; KEGG: pgi:PG0436 5.2e-103 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.486
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
  
  
 0.425
EFB36222.1
Glycosyltransferase, group 2 family protein; KEGG: vfi:VFA0478 1.0e-33 N-acetylglucosaminyltransferase K00754; Psort location: CytoplasmicMembrane, score: 9.16.
  
  
  0.414
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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