STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35167.1Hypothetical protein. (1212 aa)    
Predicted Functional Partners:
EFB35166.1
Hypothetical protein.
 
   
 0.965
EFB35473.1
PglZ domain protein; KEGG: bcl:ABC3884 7.3e-13 spo0F; stage 0 sporulation protein F K02490; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.840
EFB34128.1
Tetratricopeptide repeat protein.
  
   
 0.828
EFB33839.1
Hypothetical protein.
  
   
 0.823
EFB34469.1
Bacteroidetes-specific putative membrane protein.
  
   
 0.799
EFB33661.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: lpl:lp_2645 1.9e-16 acm2; muramidase K01185.
  
  
 0.798
EFB34059.1
Hypothetical protein.
  
   
 0.796
EFB35418.1
Hypothetical protein.
 
   
 0.789
EFB34954.1
Two component regulator propeller.
  
     0.774
EFB35168.1
FAH family protein; KEGG: chu:CHU_1891 2.2e-49 ycgM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828; Psort location: Cytoplasmic, score: 8.96.
       0.773
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.