STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35198.1KEGG: bfr:BF2194 1.1e-68 iron(III) ABC transporter ATP-binding protein K02013; Psort location: Cytoplasmic, score: 9.12. (258 aa)    
Predicted Functional Partners:
EFB34340.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.998
EFB34341.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 0.992
EFB36452.1
Hypothetical protein.
  
 0.912
EFB36098.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.912
EFB35197.1
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 5.0e-27 ribonuclease UK114.
       0.605
EFB34129.1
ABC 3 transport family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.501
EFB35365.1
ABC transporter, substrate-binding protein; Psort location: CytoplasmicMembrane, score: 8.02.
    
 0.495
ilvA
KEGG: tma:TM0356 4.4e-106 threonine dehydratase catabolic K01754; Psort location: Cytoplasmic, score: 8.96.
       0.481
EFB34937.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0251 1.7e-74 ATPase; Psort location: Cytoplasmic, score: 9.12.
  
  
 
0.427
EFB35366.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1675 1.2e-34 ATPase K02074; Psort location: Cytoplasmic, score: 9.12.
  
  
 
0.408
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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