STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35208.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
EFB35207.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.790
EFB35206.1
Hypothetical protein; KEGG: chu:CHU_1556 3.9e-82 DNA helicase K01529.
       0.732
EFB34988.1
Putative DNA-binding protein.
  
 
   0.580
EFB35470.1
Putative DNA-binding protein.
  
 
   0.565
EFB36473.1
Tetratricopeptide repeat protein.
  
  
 0.559
EFB35205.1
Kinase, PfkB family; KEGG: ape:APE_0012 2.7e-12 ribokinase K00852.
       0.549
EFB36792.1
TonB-dependent receptor.
  
     0.539
EFB35549.1
Hypothetical protein.
  
     0.476
EFB34462.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.460
EFB36333.1
VirE N-terminal domain protein.
  
     0.421
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.