STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EFB35245.1Hypothetical protein; KEGG: bfs:BF0894 5.1e-112 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208. (285 aa)    
Predicted Functional Partners:
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.980
fabD
[acyl-carrier-protein] S-malonyltransferase; KEGG: bth:BT0789 1.2e-121 malonyl CoA-acyl carrier protein transacylase K00645; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.979
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 
 0.941
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.919
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.906
fabHA
Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
 
 0.792
EFB33717.1
Hypothetical protein; KEGG: ser:SERP1684 1.3e-05 acpS; holo-(acyl-carrier-protein) synthase K00997; Psort location: Cytoplasmic, score: 8.96; Belongs to the P-Pant transferase superfamily.
  
    0.758
EFB36282.1
Biotin-requiring enzyme; KEGG: bth:BT1688 1.1e-31 bccP; biotin carboxyl carrier protein (BCCP) K01606.
  
  
 0.558
EFB34265.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: bcz:BCZK3313 7.3e-10 possible 4-hydroxybenzoyl-CoA thioesterase K01075; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.546
EFB35251.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bth:BT3232 2.8e-111 gluconate 5-dehydrogenase K00046; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.530
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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