STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35274.1Phosphoribulokinase/uridine kinase family protein; KEGG: bth:BT2527 7.5e-182 uridine kinase (uridine monophosphokinase) K00876. (553 aa)    
Predicted Functional Partners:
EFB35272.1
KEGG: pgi:PG0752 4.5e-65 uracil phosphoribosyltransferase, putative K00761.
  
 0.962
EFB33659.1
KEGG: bfr:BF1494 2.8e-40 cytidine deaminase K01489.
 
  
 0.950
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
  
  
 0.896
pyrF
KEGG: bth:BT4209 5.1e-105 orotidine 5'-phosphate decarboxylase K01591; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.895
cmk
Cytidylate kinase; KEGG: bth:BT2060 1.2e-78 cytidylate kinase K00945; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.893
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.893
EFB36462.1
Phosphorylase family; KEGG: bfr:BF1175 2.9e-109 purine nucleoside phosphorylase II K00757; Psort location: Cytoplasmic, score: 8.96.
    
 0.891
pdxB-2
4-phosphoerythronate dehydrogenase; KEGG: bfs:BF2073 6.9e-117 serA; putative D-3-phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.886
udk
Uridine kinase; KEGG: bfs:BF3035 1.5e-66 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.880
EFB36482.1
5'-nucleotidase, C-terminal domain protein; KEGG: bfs:BF1873 5.2e-174 putative 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119; Psort location: Periplasmic, score: 9.44; Belongs to the 5'-nucleotidase family.
   
 
  0.874
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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