STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35291.1Hypothetical protein; KEGG: lsl:LSL_0695 5.9e-30 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96. (233 aa)    
Predicted Functional Partners:
EFB35292.1
Hypothetical protein.
       0.773
EFB35294.1
Hypothetical protein.
       0.773
EFB35293.1
Hypothetical protein; KEGG: ssp:SSP1507 0.0088 phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
       0.572
EFB35018.1
Hypothetical protein.
  
     0.500
EFB35288.1
Hypothetical protein; KEGG: lsl:LSL_0694 2.6e-37 galactofuranosyltransferase K00754.
    0.441
EFB33799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.438
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.