STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35305.1Hypothetical protein; KEGG: pol:Bpro_5394 1.3e-28 RNA-directed DNA polymerase K00986; Psort location: Cytoplasmic, score: 8.96. (135 aa)    
Predicted Functional Partners:
EFB35304.1
Group II intron, maturase-specific domain protein; KEGG: pol:Bpro_5394 4.3e-08 RNA-directed DNA polymerase K00986.
     0.983
EFB35306.1
Hypothetical protein; KEGG: chu:CHU_0354 2.5e-39 ch1I; magnesium chelatase, subunit ChlI K07391; Psort location: Cytoplasmic, score: 8.96.
       0.427
EFB35307.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
       0.427
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.