STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35045.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
EFB35044.1
Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: tma:TM0076 3.7e-109 beta-glucosidase K05349; Psort location: Periplasmic, score: 9.44.
       0.773
EFB35046.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: bth:BT2977 6.0e-54 peptidylprolyl isomerase K01802; Psort location: OuterMembrane, score: 9.92.
       0.586
EFB35047.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: bth:BT2977 9.2e-90 peptidylprolyl isomerase K01802; Psort location: OuterMembrane, score: 9.92.
       0.504
EFB35043.1
Transcriptional regulator, AsnC family; KEGG: sat:SYN_02590 0.00027 anthranilate phosphoribosyltransferase K00766; Psort location: Cytoplasmic, score: 8.96.
       0.450
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.