STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35067.1Beta-eliminating lyase; KEGG: sac:SACOL1349 1.1e-93 putative threonine aldolase K01620; Psort location: Cytoplasmic, score: 8.96. (345 aa)    
Predicted Functional Partners:
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.886
thrC
Threonine synthase; KEGG: bfs:BF0560 2.3e-180 thrC; threonine synthase K01733; Psort location: Cytoplasmic, score: 8.96.
   
 0.848
ilvA
KEGG: tma:TM0356 4.4e-106 threonine dehydratase catabolic K01754; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.822
EFB36144.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bth:BT0409 1.1e-86 putative short-chain dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.649
cysK
Cysteine synthase A; KEGG: bth:BT3080 2.2e-120 cysteine synthase A K01738; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.478
EFB34038.1
KEGG: bth:BT0870 3.8e-164 8-amino-7-oxononanoate synthase K00652; Psort location: Cytoplasmic, score: 8.96.
     
 0.463
EFB33671.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 5.7e-145 NADH dehydrogenase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
    
  0.457
EFB34847.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
     
 0.448
trxB
KEGG: pgi:PG1134 1.9e-112 trxB; thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
    
  0.411
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.