STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35020.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (383 aa)    
Predicted Functional Partners:
EFB35519.1
Hypothetical protein.
 
     0.779
EFB35517.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.778
EFB35021.1
Glycosyltransferase, group 1 family protein; KEGG: vfi:VF0344 4.0e-80 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB33870.1
Phosphate-selective porin O and P.
  
     0.756
EFB34159.1
Hypothetical protein; KEGG: chu:CHU_0834 8.9e-07 CHU large protein K01238.
  
     0.738
EFB34585.1
Helicase C-terminal domain protein; KEGG: cal:orf19.2798 1.1e-24 putative helicase K01152.
  
     0.630
EFB34289.1
Hypothetical protein.
  
     0.630
EFB33852.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.617
EFB36614.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.609
EFB33755.1
Type III restriction enzyme, res subunit; KEGG: cal:orf19.2798 7.8e-14 putative helicase K01152.
  
     0.584
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.