STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34953.1Glycosyltransferase, group 2 family protein; KEGG: chu:CHU_2532 4.2e-30 b-glycosyltransferase-related protein, glycosyltransferase family 2 protein K00754; Psort location: Cytoplasmic, score: 8.96. (298 aa)    
Predicted Functional Partners:
EFB34954.1
Two component regulator propeller.
 
     0.906
rdgB
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.788
EFB36903.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csa:Csal_1693 6.7e-55 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.726
EFB33666.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.661
EFB34951.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.635
EFB36279.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
     0.603
EFB35167.1
Hypothetical protein.
  
    0.560
EFB33716.1
Hypothetical protein.
  
     0.518
EFB35396.1
Hypothetical protein.
 
     0.514
EFB35418.1
Hypothetical protein.
  
     0.514
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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