STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34972.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
EFB34971.1
Hypothetical protein.
 
    0.918
EFB34970.1
GH3 auxin-responsive promoter.
 
  
  0.799
EFB36819.1
Hypothetical protein; KEGG: chu:CHU_3268 1.0e-32 peptidyl-prolyl cis-trans isomerase K01802.
 
     0.734
EFB36110.1
Septum formation initiator.
  
 
   0.727
EFB35094.1
Phosphate-selective porin O and P.
  
     0.718
EFB36112.1
Hypothetical protein.
  
     0.717
EFB36883.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
EFB36249.1
Phosphate-selective porin O and P.
  
     0.709
EFB36021.1
Hypothetical protein; KEGG: hwa:HQ1489A 1.8e-05 dpg; probable dolichyl-phosphate beta-glucosyltransferase (only N-terminal homology) K00729; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.707
EFB35282.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.687
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.