STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34893.1Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 4.5e-10 blaI; beta-lactamase (penicillinase) repressor K01467. (120 aa)    
Predicted Functional Partners:
EFB34892.1
Peptidase, M56 family; Psort location: CytoplasmicMembrane, score: 9.46.
 
 
 0.983
EFB35547.1
TonB family domain protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.815
EFB35220.1
KEGG: pen:PSEEN3665 0.0028 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.540
EFB35222.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.508
EFB35329.1
Hypothetical protein.
  
     0.497
EFB34894.1
Hypothetical protein.
       0.447
EFB35600.1
KEGG: ehi:224.t00010 6.0e-09 leucine rich repeat protein K01768.
    
  0.424
EFB34891.1
Hypothetical protein.
       0.422
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.