STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34894.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EFB36932.1
Pectinesterase; KEGG: chu:CHU_0744 9.4e-07 CHU large protein K01238; Psort location: Extracellular, score: 9.96.
   
 0.722
EFB36005.1
Pectinesterase; KEGG: sus:Acid_1249 5.7e-58 pectinesterase K01051; Psort location: Extracellular, score: 9.71.
    
 0.609
EFB36836.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 9.8e-38 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.472
EFB34718.1
GDSL-like protein; KEGG: chu:CHU_0721 4.0e-25 hypothetical protein K01238.
   
 0.472
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
       0.458
EFB34896.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the CvfB family.
       0.458
EFB34556.1
GDSL-like protein; KEGG: bld:BLi04100 3.8e-36 hypothetical protein.
   
  0.454
EFB34893.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 4.5e-10 blaI; beta-lactamase (penicillinase) repressor K01467.
       0.447
EFB35672.1
GDSL-like protein; KEGG: reh:H16_B2513 1.1e-43 lysophospholipase L1 or related esterase.
    
  0.445
EFB35316.1
GDSL-like protein; KEGG: reh:H16_B2513 3.5e-42 lysophospholipase L1 or related esterase.
    
  0.445
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.