STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34829.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
EFB34830.1
N-6 DNA Methylase; KEGG: bth:BT4518 7.3e-216 Type I restriction enzyme StySJI M protein K03427.
 
     0.808
EFB34831.1
KEGG: bth:BT4517 0. Type I restriction enzyme EcoKI R protein K01153.
       0.782
EFB35809.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.774
EFB34828.1
Type I restriction modification DNA specificity domain protein; KEGG: spr:spr0448 7.7e-38 hsdS; type I site-specific deoxyribonuclease chain S K01152.
     0.769
EFB36591.1
Hypothetical protein.
  
     0.767
EFB34827.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.591
EFB34832.1
Hypothetical protein.
       0.546
EFB34833.1
Hypothetical protein.
       0.441
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.