STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34729.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
EFB34730.1
Transporter, MotA/TolQ/ExbB proton channel family protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
    0.943
EFB34732.1
KEGG: mbu:Mbur_0865 1.7e-115 CobN/magnesium chelatase; Psort location: OuterMembrane, score: 9.49.
 
  
 0.913
EFB34726.1
TonB-dependent receptor plug domain protein; KEGG: shn:Shewana3_3063 1.6e-08 phosphatidylglycerophosphatase K01094; Psort location: OuterMembrane, score: 10.00.
 
    0.612
EFB34731.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.596
EFB34733.1
Hypothetical protein.
 
    0.456
EFB34734.1
Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
 
     0.410
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.