STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34739.1ADP-ribosylglycohydrolase; KEGG: ehi:34.t00046 2.8e-40 ADP-ribosylglycohydrolase, putative K05521. (340 aa)    
Predicted Functional Partners:
EFB34740.1
ADP-ribosylglycohydrolase; KEGG: sat:SYN_02522 3.6e-56 ADP-ribosylglycohydrolase K01250.
 
     0.809
pgpA-2
KEGG: bth:BT1525 8.5e-32 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EFB34742.1
Hypothetical protein.
       0.773
EFB34738.1
Hypothetical protein.
       0.727
amt
Ammonium transporter; KEGG: ter:Tery_3993 5.0e-71 adenylate/guanylate cyclase K01769; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.612
EFB34743.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
       0.556
EFB34744.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.556
EFB34746.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.555
EFB34747.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.537
EFB34851.1
Nitrogen regulatory protein P-II; KEGG: cya:CYA_1505 0.00017 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; Belongs to the P(II) protein family.
    
 
 0.468
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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