STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34743.1Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00. (949 aa)    
Predicted Functional Partners:
EFB34744.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB34745.1
Cpl-7 lysozyme C-terminal domain protein.
       0.615
EFB34746.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
       0.574
pgpA-2
KEGG: bth:BT1525 8.5e-32 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.561
EFB34739.1
ADP-ribosylglycohydrolase; KEGG: ehi:34.t00046 2.8e-40 ADP-ribosylglycohydrolase, putative K05521.
       0.556
EFB34740.1
ADP-ribosylglycohydrolase; KEGG: sat:SYN_02522 3.6e-56 ADP-ribosylglycohydrolase K01250.
       0.556
EFB34742.1
Hypothetical protein.
       0.556
EFB36105.1
TrkA C-terminal domain protein; KEGG: ilo:IL2624 0.0045 atpE; F0F1-type ATP synthase, subunit c K02110; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.529
EFB34747.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
       0.527
EFB34748.1
Hypothetical protein.
       0.527
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.