STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34743.1Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00. (949 aa)    
Predicted Functional Partners:
EFB34744.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB35913.1
Mg2+ transporter-C family protein; KEGG: eci:UTI89_C4039 2.2e-31 yhiD; hypothetical protein YhiD K07507; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.638
EFB36105.1
TrkA C-terminal domain protein; KEGG: ilo:IL2624 0.0045 atpE; F0F1-type ATP synthase, subunit c K02110; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.636
EFB34745.1
Cpl-7 lysozyme C-terminal domain protein.
       0.615
EFB36041.1
TrkA C-terminal domain protein; KEGG: ecj:JW3469 4.0e-08 arsB; arsenite/antimonite transporter K03893; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.574
EFB34746.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
       0.574
pgpA-2
KEGG: bth:BT1525 8.5e-32 phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.558
EFB34739.1
ADP-ribosylglycohydrolase; KEGG: ehi:34.t00046 2.8e-40 ADP-ribosylglycohydrolase, putative K05521.
       0.556
EFB34740.1
ADP-ribosylglycohydrolase; KEGG: sat:SYN_02522 3.6e-56 ADP-ribosylglycohydrolase K01250.
       0.556
EFB34742.1
Hypothetical protein.
       0.556
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.