STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34748.1Hypothetical protein. (628 aa)    
Predicted Functional Partners:
EFB34747.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB34746.1
Bacterial stress protein; Psort location: Cytoplasmic, score: 8.96.
       0.726
EFB34745.1
Cpl-7 lysozyme C-terminal domain protein.
       0.656
EFB34749.1
Hypothetical protein.
       0.546
EFB34743.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
       0.527
EFB34744.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.527
EFB34750.1
Hypothetical protein.
       0.516
EFB34751.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.500
EFB34752.1
Hypothetical protein.
       0.454
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.