STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34778.1KEGG: mes:Meso_3687 3.0e-59 alpha amylase, catalytic region K01187; Psort location: Cytoplasmic, score: 9.26. (581 aa)    
Predicted Functional Partners:
pulA
Pullulanase, type I; KEGG: bth:BT4689 6.5e-160 pullulanase precursor K01200; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
 0.949
EFB34180.1
Alpha amylase, catalytic domain protein; KEGG: bfr:BF2243 0. 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.902
EFB34779.1
Hypothetical protein; KEGG: xcv:XCV2800 2.3e-139 putative alpha-glucosidase K01187.
    
  0.872
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688.
 
 0.868
EFB34690.1
KEGG: bfr:BF3828 2.9e-253 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.839
EFB35123.1
Alpha amylase, catalytic domain protein; KEGG: sde:Sde_0563 4.4e-32 alpha-amylase K01176.
  
  
  0.800
EFB36922.1
Glycosyl hydrolase, family 57; KEGG: pgi:PG1683 6.8e-110 hypothetical protein K07405.
    
 0.792
EFB34689.1
Hemagglutinin esterase; KEGG: xcv:XCV2800 6.3e-130 putative alpha-glucosidase K01187.
    
  0.675
EFB36304.1
Starch synthase catalytic domain protein; KEGG: chu:CHU_3836 4.7e-54 glgA; glycogen synthase-related protein K00703; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.597
EFB35345.1
Sugar-binding domain protein; KEGG: efa:EF1922 2.1e-11 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.584
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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