STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34717.1Histidine acid phosphatase; KEGG: dre:394075 2.3e-05 zgc:56080 K03103. (435 aa)    
Predicted Functional Partners:
EFB34718.1
GDSL-like protein; KEGG: chu:CHU_0721 4.0e-25 hypothetical protein K01238.
       0.768
EFB36601.1
HD domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.652
EFB36932.1
Pectinesterase; KEGG: chu:CHU_0744 9.4e-07 CHU large protein K01238; Psort location: Extracellular, score: 9.96.
  
     0.650
EFB33891.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
     0.648
EFB34719.1
Hypothetical protein.
       0.635
EFB36579.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.622
EFB36046.1
CHC2 zinc finger domain protein; KEGG: rba:RB6344 0.00012 dnaG; DNA primase K02316.
  
     0.609
EFB33894.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.596
EFB33687.1
Hypothetical protein; KEGG: pfa:PF14_0381 0.0097 delta-aminolevulinic acid dehydratase K01698; Psort location: OuterMembrane, score: 9.49.
  
     0.577
EFB35812.1
DNA-binding helix-turn-helix protein.
  
     0.575
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.