STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34718.1GDSL-like protein; KEGG: chu:CHU_0721 4.0e-25 hypothetical protein K01238. (371 aa)    
Predicted Functional Partners:
EFB35849.1
Hypothetical protein.
   
 0.965
EFB36843.1
Hypothetical protein; KEGG: tma:TM1751 0.0033 endoglucanase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.937
EFB36836.1
Cellulase (glycosyl hydrolase family 5); KEGG: sde:Sde_2636 9.8e-38 DNA mismatch repair protein K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.812
EFB35941.1
Hypothetical protein.
  
 
  0.808
EFB34085.1
Hypothetical protein.
  
 
  0.807
EFB36178.1
Hypothetical protein; KEGG: chu:CHU_1557 1.5e-06 CHU large protein; uncharacterized K01238.
  
 
  0.784
EFB35242.1
SusD family protein.
  
 
  0.770
EFB34717.1
Histidine acid phosphatase; KEGG: dre:394075 2.3e-05 zgc:56080 K03103.
       0.768
EFB34682.1
SusD family protein.
  
 
  0.763
EFB35378.1
PEGA domain protein; KEGG: aba:Acid345_0037 0.00014 serine/threonine protein kinase K08884.
  
 
  0.752
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.