STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34658.1Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (512 aa)    
Predicted Functional Partners:
EFB34241.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
 
 
 0.632
EFB34001.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
 
 
 0.532
EFB34656.1
Hypothetical protein.
 
  
 0.506
EFB34657.1
Transcriptional regulator, MerR family.
       0.447
EFB34655.1
VirE N-terminal domain protein.
 
     0.431
EFB34659.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.406
EFB36157.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.