STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34687.1Alpha amylase, catalytic domain protein; KEGG: sru:SRU_2409 1.2e-119 glycosyl hydrolase, family 13, putative K00701; Psort location: Cytoplasmic, score: 9.26. (641 aa)    
Predicted Functional Partners:
pulA
Pullulanase, type I; KEGG: bth:BT4689 6.5e-160 pullulanase precursor K01200; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
 0.994
EFB34689.1
Hemagglutinin esterase; KEGG: xcv:XCV2800 6.3e-130 putative alpha-glucosidase K01187.
 
  
  0.860
EFB34690.1
KEGG: bfr:BF3828 2.9e-253 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.809
EFB34692.1
KEGG: efa:EF1922 0.0011 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.792
EFB34696.1
SusD family protein.
 
    0.769
EFB34691.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.758
EFB34779.1
Hypothetical protein; KEGG: xcv:XCV2800 2.3e-139 putative alpha-glucosidase K01187.
 
  
  0.747
EFB34695.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.742
EFB34698.1
Hypothetical protein.
 
    0.708
EFB35345.1
Sugar-binding domain protein; KEGG: efa:EF1922 2.1e-11 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.691
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.