STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34638.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (585 aa)    
Predicted Functional Partners:
EFB34637.1
Hypothetical protein; KEGG: ayw:AYWB_115 1.6e-08 uvrD; UvrD helicase K03657.
 
   
 0.960
EFB34636.1
Hypothetical protein.
       0.773
EFB34290.1
KEGG: aci:ACIAD3431 4.0e-24 putative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS) K01154.
  
  
 0.740
EFB34844.1
Hypothetical protein; KEGG: pab:PAB2150 2.5e-14 type I restriction-modification enzyme, S subunit K01154; Psort location: Cytoplasmic, score: 8.96.
 
    0.480
EFB34826.1
KEGG: mpn:MPN089 7.3e-22 hsdS, R02_orf335; type I restriction enzyme ecokI specificity protein (hsdS) K01154.
 
    0.476
EFB36287.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.472
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.472
EFB34639.1
Hypothetical protein.
       0.440
EFB34830.1
N-6 DNA Methylase; KEGG: bth:BT4518 7.3e-216 Type I restriction enzyme StySJI M protein K03427.
 
  
 0.411
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.