STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34501.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (758 aa)    
Predicted Functional Partners:
EFB34500.1
Hypothetical protein.
 
     0.946
EFB34640.1
Hypothetical protein.
 
     0.773
EFB34650.1
Hypothetical protein.
 
     0.773
EFB34502.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.709
EFB34503.1
Hypothetical protein.
       0.709
EFB36157.1
Hypothetical protein.
  
     0.536
EFB36517.1
Hypothetical protein; KEGG: cal:orf19.4072 1.1e-05 HYR10; similar to cell surface flocculin K01186; Psort location: OuterMembrane, score: 9.49.
  
     0.515
EFB35318.1
Hypothetical protein; KEGG: hit:NTHI1629 6.1e-07 putative 5'(3')-deoxyribonucleotidase K01112.
  
     0.462
EFB34464.1
Gram-positive signal peptide protein, YSIRK family.
  
     0.461
EFB35239.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.