STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34507.1Haloacid dehalogenase-like hydrolase; KEGG: tko:TK0058 2.1e-07 hydrolase, HAD superfamily K01560; Psort location: Cytoplasmic, score: 8.96. (226 aa)    
Predicted Functional Partners:
EFB34510.1
ATP-grasp domain protein; KEGG: reh:H16_A2106 1.1e-22 carB1; carbamoylphosphate synthase, large subunit K01954; Psort location: Cytoplasmic, score: 8.96.
 
     0.911
EFB34508.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1559 5.0e-27 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
    
  0.782
EFB34512.1
Bacterial sugar transferase; KEGG: rso:RS02342 3.2e-55 RSp1008; probable glycosyl transferase transmembrane protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.684
EFB34511.1
Hypothetical protein; KEGG: lla:L0026 1.4e-08 thgA; thiogalactoside acetyltransferase K00633.
 
    0.672
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.649
EFB34509.1
Hypothetical protein; KEGG: lsl:LSL_1559 5.4e-05 rfaG; glycosyltransferase K00754.
    
  0.617
EFB34513.1
Glycosyltransferase, group 1 family protein; KEGG: saa:SAUSA300_0163 2.8e-21 cap5L; capsular polysaccharide biosynthesis protein Cap5L K00754; Psort location: Cytoplasmic, score: 8.96.
    
  0.617
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.609
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.599
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.583
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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