STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34511.1Hypothetical protein; KEGG: lla:L0026 1.4e-08 thgA; thiogalactoside acetyltransferase K00633. (115 aa)    
Predicted Functional Partners:
EFB34512.1
Bacterial sugar transferase; KEGG: rso:RS02342 3.2e-55 RSp1008; probable glycosyl transferase transmembrane protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.808
EFB34510.1
ATP-grasp domain protein; KEGG: reh:H16_A2106 1.1e-22 carB1; carbamoylphosphate synthase, large subunit K01954; Psort location: Cytoplasmic, score: 8.96.
     
 0.775
EFB34509.1
Hypothetical protein; KEGG: lsl:LSL_1559 5.4e-05 rfaG; glycosyltransferase K00754.
  
    0.774
EFB34513.1
Glycosyltransferase, group 1 family protein; KEGG: saa:SAUSA300_0163 2.8e-21 cap5L; capsular polysaccharide biosynthesis protein Cap5L K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.774
EFB34529.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100.
  
 
 0.673
EFB34507.1
Haloacid dehalogenase-like hydrolase; KEGG: tko:TK0058 2.1e-07 hydrolase, HAD superfamily K01560; Psort location: Cytoplasmic, score: 8.96.
 
    0.672
EFB34505.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: cno:NT01CX_1789 9.6e-65 perosamine synthetase, putative K01726; Psort location: Cytoplasmic, score: 8.96; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.639
EFB34523.1
KEGG: bcl:ABC3103 4.5e-33 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
     0.636
EFB34514.1
Hypothetical protein.
       0.613
alr-2
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.613
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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