STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34524.1Alcohol dehydrogenase, iron-dependent; KEGG: fal:FRAAL6379 1.9e-34 putative alcohol dehydrogenase K00100; Psort location: Cytoplasmic, score: 9.26. (373 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.955
aepX
Phosphoenolpyruvate mutase; KEGG: azo:azo2698 8.6e-126 pepM; putative phosphoenolpyruvate phosphomutase K01841; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.925
aepY
KEGG: azo:azo2699 7.4e-88 phosphonopyruvate decarboxylase, putative K01618.
 
   
 0.896
EFB34847.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.819
gltA
KEGG: bth:BT4310 0. NADPH-dependent glutamate synthase small chain K00266; Psort location: Cytoplasmic, score: 9.97.
    
 0.794
EFB34518.1
AMP-binding enzyme; KEGG: lla:L91510 3.7e-47 dltA; D-alanine activating enzyme K03367; Psort location: Cytoplasmic, score: 9.26.
     
 0.763
EFB34521.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.763
EFB34523.1
KEGG: bcl:ABC3103 4.5e-33 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
       0.761
EFB34519.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 3.1e-34 glycosyl transferase, group 1 K00703; Psort location: Cytoplasmic, score: 8.96.
       0.746
EFB34520.1
Glycosyltransferase, group 2 family protein; KEGG: mma:MM1141 3.6e-33 glycosyltransferase K00754.
       0.746
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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