STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34378.1Ser/Thr phosphatase family protein; KEGG: rsp:RSP_0955 1.5e-29 5'-nucleotidase K01081; Psort location: Periplasmic, score: 9.44. (292 aa)    
Predicted Functional Partners:
EFB34380.1
5'-nucleotidase, C-terminal domain protein; KEGG: tma:TM1878 2.4e-16 UDP-sugar hydrolase K01081:K08077; Psort location: Periplasmic, score: 9.44.
 
  
  0.953
EFB36482.1
5'-nucleotidase, C-terminal domain protein; KEGG: bfs:BF1873 5.2e-174 putative 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119; Psort location: Periplasmic, score: 9.44; Belongs to the 5'-nucleotidase family.
  
  
 
0.905
tdk
Thymidine kinase; KEGG: bfr:BF0659 2.6e-78 thymidine kinase K00857; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.900
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.895
EFB33659.1
KEGG: bfr:BF1494 2.8e-40 cytidine deaminase K01489.
 
  
  0.895
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.887
EFB36462.1
Phosphorylase family; KEGG: bfr:BF1175 2.9e-109 purine nucleoside phosphorylase II K00757; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.887
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
   
 
  0.885
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.882
EFB36898.1
Inosine guanosine and xanthosine phosphorylase family; KEGG: bfs:BF3274 1.4e-79 punA, deoD, pnp; putative purine nucleoside phosphorylase I K03783; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.881
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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