Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFB34331.1 | apt | PREVCOP_06240 | PREVCOP_06239 | Hypothetical protein. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.773 |
| EFB34331.1 | gidA | PREVCOP_06240 | PREVCOP_06241 | Hypothetical protein. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.668 |
| EFB34331.1 | sdhC | PREVCOP_06240 | PREVCOP_06242 | Hypothetical protein. | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | 0.414 |
| EFB34331.1 | uvrC | PREVCOP_06240 | PREVCOP_06238 | Hypothetical protein. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.501 |
| apt | EFB34331.1 | PREVCOP_06239 | PREVCOP_06240 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.773 |
| apt | gidA | PREVCOP_06239 | PREVCOP_06241 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.753 |
| apt | sdhC | PREVCOP_06239 | PREVCOP_06242 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | 0.567 |
| apt | uvrC | PREVCOP_06239 | PREVCOP_06238 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.641 |
| gidA | EFB34331.1 | PREVCOP_06241 | PREVCOP_06240 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Hypothetical protein. | 0.668 |
| gidA | apt | PREVCOP_06241 | PREVCOP_06239 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.753 |
| gidA | sdhC | PREVCOP_06241 | PREVCOP_06242 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | 0.619 |
| gidA | uvrC | PREVCOP_06241 | PREVCOP_06238 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.600 |
| sdhC | EFB34331.1 | PREVCOP_06242 | PREVCOP_06240 | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.414 |
| sdhC | apt | PREVCOP_06242 | PREVCOP_06239 | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.567 |
| sdhC | gidA | PREVCOP_06242 | PREVCOP_06241 | Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bfs:BF4339 8.9e-76 fumarate reductase transmembrane cytochrome b subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.619 |
| uvrC | EFB34331.1 | PREVCOP_06238 | PREVCOP_06240 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Hypothetical protein. | 0.501 |
| uvrC | apt | PREVCOP_06238 | PREVCOP_06239 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.641 |
| uvrC | gidA | PREVCOP_06238 | PREVCOP_06241 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.600 |